Package transsys :: Module optim :: Class ExpressionSeriesSquareSumObjective
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Class ExpressionSeriesSquareSumObjective

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               object --+        
                        |        
AbstractObjectiveFunction --+    
                            |    
    ExpressionSeriesObjective --+
                                |
                               ExpressionSeriesSquareSumObjective

The sum of squared Euclidean distances to a desired set of expression profiles as an objective function.

Instance Methods [hide private]
 
__init__(self, f=None)
Construct an instance holding an empty series.
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__call__(self, transsys_program)
Abstract call method, raises exception.
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Inherited from ExpressionSeriesObjective: __str__, readProfiles, series_length

Inherited from object: __delattr__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, f=None)
(Constructor)

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Construct an instance holding an empty series.

Overrides: object.__init__
(inherited documentation)

__call__(self, transsys_program)
(Call operator)

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Abstract call method, raises exception.

Parameters:
  • transsys_program - the transsys program to be evaluated
Overrides: AbstractObjectiveFunction.__call__
(inherited documentation)