Module arrtool :: Class MicroarrayData
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Class MicroarrayData

source code

Instance Methods [hide private]
 
__init__(self) source code
 
setup_gene_dict(self) source code
 
num_rows(self) source code
 
num_columns(self) source code
 
read_file(self, f) source code
 
column_type(self, col) source code
 
write_gnuplot_file(self, f) source code
 
regulation_index(self, row_index) source code
 
regulation_index_list(self) source code
 
experiment_plots(self, gpcfile, espec_list, histo_max, histo_nbins, basename, cmp_basename=None)
write a gnuplot file containing the expression profiles of all genes, and also a histogram showing a profile of regulatory strengths
source code